Towards Understanding The Brain
ATLAS AND DATA
Mouse Single-neuron Projectome
Macaque Single-cell Spatial Transcriptomics Atlas
Zebrafish Transcriptomic and Epigenetic Atlas
Mouse Single-cell Spatial Transcriptomics Atlas
Mouse Hippocampal Longitudinal Axis
Whole-brain Connectivity of Monkey Claustrum
Claustrum Spatial Transcriptome Atlas
Macaque Connectivity Matrix
Coming soonTOOLS
Desktop
GAPR (Gapr accelerates projectome reconstruction) This software has been developed for the automated reconstruction of large-scale single neurons.
Online
Mouse Single-Neuron Clustering This tool integrates some common clustering algorithms to classify neurons based on their morphological characteristics.
Library
NeuronVis NeuronVis is a python SDK package for ION data access, visualization, analysis, including some analyse cases.
Library
Pyswcloader This library is built for single-cell clustering based on neuron morphology and projection analysis.
Explore More
HIGHLIGHT
HIPPOCAMPUS
CLAUSTRUM
PUBLICATIONS
Single-neuron projectome reveals organization of somatosensory ascending pathways in the mouse brain
April 9, 2025Single-cell spatial transcriptome atlas and whole-brain connectivity of the macaque claustrum
Mar 30, 2025Projectome-based characterization of hypothalamic peptidergic neurons in male mice
Mar 26, 2025Single-cell spatial transcriptomic atlas of the whole mouse brain
Mar 23, 2025 Explore More
